C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097908 Ccdc23-003 ENSMUSG00000028643 10090 + 4:119195496-119201298 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonLungOvaryPlacentaTestisENSMUST00000097908
Transcript ID Adipose Adrenal Brain Colon Lung Ovary Placenta Testis
ENSMUST00000097908 2.612±0.36 1.819±0.31 6.496±1.49 2.515±0.32 1.527±0.05 3.600±0.86 2.656±1.12 102.952±6.48

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008N2 CIL_0008N2_0002 VISTA 4:118719151-119320076
CIL_0008PM CIL_0008PM_0002 VISTA 4:118938785-119540197

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0009306 IEA protein secretion
GO:0010596 IEA negative regulation of endothelial cell migration
GO:0031397 IEA negative regulation of protein ubiquitination
GO:0045177 IEA apical part of cell

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372521 CCDC23-001 protein_coding Homo_sapiens 0 274
ENST00000372522 CCDC23-002 protein_coding Homo_sapiens 0 287

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