C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 53, member B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000097999 Fam53b-001 ENSMUSG00000030956 10090 - 7:132712082-132813528 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000097999
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000097999 3.961±0.57 6.502±0.20 1.095±0.51 1.728±0.34 6.556±1.06 2.251±0.51 1.493±0.55 1.890±0.49 0.580±0.12 6.461±0.85 2.539±0.93 3.351±0.32 1.029±0.53 0.523±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WI CIL_0002WI_0002 CGP 7:129591863-133123350
CIL_0001BE CIL_0001BE_0002 CGP 7:130162451-133123350
CIL_00084V CIL_00084V_0002 VISTA 7:132507589-133108550

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000280780 FAM53B-003 protein_coding Homo_sapiens 0 1066
ENST00000337318 FAM53B-001 protein_coding Homo_sapiens 0 1356
ENST00000392754 FAM53B-004 protein_coding Homo_sapiens 0 1356
ENST00000494792 RP11-12J10.3-001 nonsense_mediated_decay Homo_sapiens 0 1064

Loading