C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: hemoglobin, beta adult t chain
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098192 Hbb-bt-001 ENSMUSG00000073940 10090 - 7:103812524-103813996 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098192
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098192 25.451±2.13 25.138±3.64 8.387±1.01 291.873±280.87 17.770±7.05 18.738±12.26 627.950±720.56 79.744±15.52 17.622±2.52 519.254±199.82 8.254±2.82 14.039±6.91 254.108±268.21 2.626±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PR CIL_0007PR_0002 VISTA 7:103558636-104159881
CIL_0003R8 CIL_0003R8_0007 CGP 7:103812524-103828096

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005833 IEA hemoglobin complex
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000292896 HBE1-201 protein_coding Homo_sapiens 0 298
ENST00000330597 HBG1-001 protein_coding Homo_sapiens 0 276
ENST00000335295 HBB-001 protein_coding Homo_sapiens 0 442
ENST00000336906 HBG2-201 protein_coding Homo_sapiens 0 287
ENST00000380237 HBE1-001 protein_coding Homo_sapiens 0 298
ENST00000380252 HBG2-004 protein_coding Homo_sapiens 0 259
ENST00000380259 HBG2-001 protein_coding Homo_sapiens 0 287
ENST00000380315 HBB-004 protein_coding Homo_sapiens 0 261
ENST00000444587 HBG2-003 processed_transcript Homo_sapiens 0 230
ENST00000475226 HBB-003 retained_intron Homo_sapiens 0 254
ENST00000485743 HBB-002 retained_intron Homo_sapiens 0 346
ENST00000620888 HBG2-202 protein_coding Homo_sapiens 0 281
ENST00000623781 AC104389.2-201 protein_coding Homo_sapiens 0 231
ENST00000624109 AC104389.1-201 protein_coding Homo_sapiens 0 237

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