C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: trophoblast glycoprotein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098500 Tpbg-001 ENSMUSG00000035274 10090 + 9:85842865-85847040 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098500
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098500 1.943±1.76 1.272±0.41 5.445±1.08 4.653±2.42 4.853±2.36 2.636±1.16 0.115±0.00 0.500±0.27 0.113±0.09 1.110±0.27 0.052±0.02 6.077±3.44 0.366±0.33 0.128±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006GF CIL_0006GF_0002 CGP 9:85687360-85847040
CIL_0006GG CIL_0006GG_0002 CGP 9:85842380-86464950

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005737 IDA cytoplasm
GO:0005783 IDA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369750 TPBG-001 protein_coding Homo_sapiens 0 1330
ENST00000535040 TPBG-201 protein_coding Homo_sapiens 0 1330
ENST00000543496 TPBG-202 protein_coding Homo_sapiens 0 1312

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