C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 33
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098682 Ccdc33-001 ENSMUSG00000037716 10090 - 9:58028678-58118823 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastHeartKidneyLungMuscleOvaryENSMUST00000098682
Transcript ID Adipose Adrenal Bladder Breast Heart Kidney Lung Muscle Ovary
ENSMUST00000098682 0.040±0.03 0.050±0.03 0.023±0.00 0.023±0.00 0.056±0.00 0.032±0.00 0.499±0.19 0.008±0.00 1.751±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UD CIL_0007UD_0002 VISTA 9:57506610-58107834
CIL_00029J CIL_00029J_0002 CGP 9:58006411-58118823
CIL_00045Q CIL_00045Q_0002 CGP 9:58028677-58153996

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000268082 CCDC33-002 protein_coding Homo_sapiens 0 558
ENST00000321374 CCDC33-004 nonsense_mediated_decay Homo_sapiens 0 453
ENST00000398814 CCDC33-001 protein_coding Homo_sapiens 0 453
ENST00000558659 CCDC33-003 protein_coding Homo_sapiens 0 558
ENST00000558821 CCDC33-006 protein_coding Homo_sapiens 0 453
ENST00000560565 CCDC33-005 retained_intron Homo_sapiens 0 353

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