C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: layilin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098782 Layn-201 ENSMUSG00000060594 10090 - 9:51056780-51077094 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000098782
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000098782 1.251±0.57 1.009±0.20 1.714±0.05 1.276±1.09 0.973±0.47 0.492±0.22 0.529±0.25 0.454±0.14 0.167±0.06 1.875±0.27 0.241±0.07 4.100±3.09 1.264±0.90 0.657±0.42

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003WI CIL_0003WI_0003 CGP 9:50892801-51077094
CIL_0003W9 CIL_0003W9_0002 CGP 9:51056780-51102078

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001726 ISS ruffle
GO:0005540 ISS hyaluronic acid binding
GO:0005925 IEA focal adhesion
GO:0009986 ISS cell surface
GO:0016021 IEA integral component of membrane
GO:0030246 IEA carbohydrate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000375614 LAYN-001 protein_coding Homo_sapiens 0 1142
ENST00000375615 LAYN-002 protein_coding Homo_sapiens 0 1229
ENST00000436913 LAYN-201 protein_coding Homo_sapiens 0 604
ENST00000525126 LAYN-003 protein_coding Homo_sapiens 0 1210
ENST00000525866 LAYN-004 nonsense_mediated_decay Homo_sapiens 0 604
ENST00000528102 LAYN-011 protein_coding Homo_sapiens 0 599
ENST00000528924 LAYN-010 processed_transcript Homo_sapiens 0 375
ENST00000530962 LAYN-008 protein_coding Homo_sapiens 0 780
ENST00000533265 LAYN-005 protein_coding Homo_sapiens 0 1123
ENST00000533999 LAYN-009 protein_coding Homo_sapiens 0 573

Loading