C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10689
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098864 Gm10689-201 ENSMUSG00000074412 10090 + 8:25454273-25454704 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000098864
Transcript ID Adipose Bladder Brain Breast Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000098864 0.263±0.00 0.403±0.12 0.096±0.03 0.451±0.00 0.397±0.00 0.166±0.04 0.184±0.06 0.726±0.48 0.341±0.16 0.448±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008D9 CIL_0008D9_0002 VISTA 8:25042689-25644335
CIL_0008H7 CIL_0008H7_0002 VISTA 8:25139932-25741457
CIL_0008SM CIL_0008SM_0002 VISTA 8:25140188-25742103
CIL_0008NR CIL_0008NR_0002 VISTA 8:25243011-25845762

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296674 RPS23-001 protein_coding Homo_sapiens 0 544
ENST00000429775 RPS23P8-001 processed_pseudogene Homo_sapiens 0 405
ENST00000466210 RPS23P7-001 processed_pseudogene Homo_sapiens 0 405
ENST00000503605 RPS23-003 processed_transcript Homo_sapiens 0 475
ENST00000504293 RPS23-004 retained_intron Homo_sapiens 0 538
ENST00000507980 RPS23-006 protein_coding Homo_sapiens 0 226
ENST00000508814 ATG10-010 processed_transcript Homo_sapiens 4.99983e-42 174
ENST00000510210 RPS23-008 protein_coding Homo_sapiens 0 449
ENST00000512493 RPS23-007 protein_coding Homo_sapiens 0 449
ENST00000514253 ATG10-009 processed_transcript Homo_sapiens 9.99967e-42 174

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