C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ADP-ribosylation factor interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000098990 Arfip1-001 ENSMUSG00000074513 10090 - 3:84496093-84582534 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartLiverMuscleOvaryPlacentaTestisENSMUST00000098990
Transcript ID Bladder Brain Breast Heart Liver Muscle Ovary Placenta Testis
ENSMUST00000098990 9.643±1.49 5.469±1.61 1.961±0.00 2.584±0.62 2.749±0.93 3.711±0.99 8.924±5.93 10.917±2.35 1.336±0.60

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00064N CIL_00064N_0002 CGP 3:84444035-85887516
CIL_0004PH CIL_0004PH_0002 CGP 3:84496093-85887516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0019904 IEA protein domain specific binding
GO:0042802 IPI identical protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000353617 ARFIP1-201 protein_coding Homo_sapiens 0 1495
ENST00000356064 ARFIP1-004 protein_coding Homo_sapiens 0 1376
ENST00000405727 ARFIP1-003 protein_coding Homo_sapiens 0 1670
ENST00000429148 ARFIP1-002 protein_coding Homo_sapiens 0 1033
ENST00000451320 ARFIP1-001 protein_coding Homo_sapiens 0 1495
ENST00000510497 ARFIP1-011 processed_transcript Homo_sapiens 0 350
ENST00000511289 ARFIP1-008 processed_transcript Homo_sapiens 0 455
ENST00000513361 ARFIP1-009 processed_transcript Homo_sapiens 0 372
ENST00000514499 ARFIP1-010 processed_transcript Homo_sapiens 0 444
ENST00000618090 ARFIP1-202 protein_coding Homo_sapiens 0 1757

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