C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankrin repeat and ubiquitin domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099091 Ankub1-001 ENSMUSG00000074591 10090 - 3:57666485-57692537 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000099091
Transcript ID Adipose Adrenal Bladder Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000099091 0.025±0.00 0.090±0.00 0.018±0.00 0.112±0.13 0.062±0.00 0.045±0.00 0.037±0.02 0.077±0.07 0.122±0.03 0.007±0.00 0.172±0.09 0.014±0.01 0.174±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002R7 CIL_0002R7_0002 CGP 3:57642904-57692537
CIL_0002R6 CIL_0002R6_0002 CGP 3:57666485-57835233

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000245304 RAP2A-001 protein_coding Homo_sapiens 5e-23 115
ENST00000446160 ANKUB1-201 protein_coding Homo_sapiens 0 641
ENST00000462519 ANKUB1-001 protein_coding Homo_sapiens 0 641
ENST00000474404 ANKUB1-003 retained_intron Homo_sapiens 0 403
ENST00000484019 ANKUB1-002 nonsense_mediated_decay Homo_sapiens 0 252
ENST00000497728 ANKUB1-005 processed_transcript Homo_sapiens 0 211

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