C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099223 Snx16-202 ENSMUSG00000027534 10090 - 3:10417819-10440124 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaENSMUST00000099223
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENSMUST00000099223 0.352±0.18 2.366±0.74 0.444±0.11 1.676±0.24 0.398±0.13 0.426±0.08 0.177±0.05 0.458±0.19 0.227±0.12 0.411±0.00 0.643±0.65 0.475±0.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00071W CIL_00071W_0002 CGP 3:10366907-10440124

Gene Ontology

GO IDEvidence TypeGO Description
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000345957 SNX16-001 protein_coding Homo_sapiens 0 1016
ENST00000353788 SNX16-002 protein_coding Homo_sapiens 0 460
ENST00000396330 SNX16-201 protein_coding Homo_sapiens 0 1011
ENST00000519212 SNX16-009 retained_intron Homo_sapiens 0 202
ENST00000521810 SNX16-003 protein_coding Homo_sapiens 0 758
ENST00000523757 SNX16-006 protein_coding Homo_sapiens 0 459
ENST00000615066 SNX16-202 protein_coding Homo_sapiens 0 1011

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