C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: sorbin and SH3 domain containing 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099466 Sorbs1-201 ENSMUSG00000025006 10090 - 19:40295049-40402267 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainLungOvaryPlacentaTestisENSMUST00000099466
Transcript ID Bladder Brain Lung Ovary Placenta Testis
ENSMUST00000099466 78.212±0.00 17.600±0.00 2.685±0.00 17.900±20.78 16.198±9.36 0.972±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00095J CIL_00095J_0002 VISTA 19:40075645-40678667
CIL_0007T2 CIL_0007T2_0002 VISTA 19:40167411-40768695
CIL_00067J CIL_00067J_0002 CGP 19:40221173-40402267
CIL_00067I CIL_00067I_0002 CGP 19:40295049-40588463

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001725 IDA stress fiber
GO:0007015 IEA actin filament organization
GO:0008286 IEA insulin receptor signaling pathway
GO:0019901 IDA protein kinase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000277982 SORBS1-005 protein_coding Homo_sapiens 0 1245
ENST00000306402 SORBS1-001 protein_coding Homo_sapiens 0 2394
ENST00000354106 SORBS1-008 protein_coding Homo_sapiens 0 1576
ENST00000361941 SORBS1-004 protein_coding Homo_sapiens 0 1243
ENST00000371227 SORBS1-015 protein_coding Homo_sapiens 0 1243
ENST00000371228 SORBS1-019 protein_coding Homo_sapiens 2e-27 126
ENST00000371239 SORBS1-009 protein_coding Homo_sapiens 0 1576
ENST00000371241 SORBS1-007 protein_coding Homo_sapiens 0 1426
ENST00000371245 SORBS1-006 protein_coding Homo_sapiens 0 1245
ENST00000371246 SORBS1-201 protein_coding Homo_sapiens 0 1245
ENST00000371247 SORBS1-202 protein_coding Homo_sapiens 0 1243
ENST00000371249 SORBS1-002 protein_coding Homo_sapiens 0 1107
ENST00000465489 SORBS1-012 processed_transcript Homo_sapiens 0 499
ENST00000472854 SORBS1-013 processed_transcript Homo_sapiens 0 315
ENST00000474353 SORBS1-014 processed_transcript Homo_sapiens 0 1487
ENST00000607232 SORBS1-017 protein_coding Homo_sapiens 0 1299

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