C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: protein (peptidyl-prolyl cis/trans isomerase) NIMA-interacting 1, retrogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000099659 Pin1rt1-001 ENSMUSG00000074997 10090 - 2:104713926-104716379 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000099659
Transcript ID Bladder Brain Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000099659 0.030±0.00 0.034±0.02 0.045±0.01 0.063±0.00 0.027±0.00 0.041±0.00 0.628±0.32 0.036±0.00 2.156±0.20

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008SB CIL_0008SB_0002 VISTA 2:104593780-105194712

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000413 IEA protein peptidyl-prolyl isomerization
GO:0003755 IEA peptidyl-prolyl cis-trans isomerase activity
GO:0006457 IEA protein folding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247970 PIN1-001 protein_coding Homo_sapiens 0 564
ENST00000380889 PIN1-004 processed_transcript Homo_sapiens 0 497
ENST00000412108 PIN1P1-002 processed_transcript Homo_sapiens 0 379
ENST00000585442 PIN1-011 processed_transcript Homo_sapiens 0 501
ENST00000586025 PIN1-005 retained_intron Homo_sapiens 0 505
ENST00000586352 PIN1-010 nonsense_mediated_decay Homo_sapiens 0 505
ENST00000587625 PIN1-007 protein_coding Homo_sapiens 0 451
ENST00000588695 PIN1-008 protein_coding Homo_sapiens 0 562
ENST00000589058 PIN1-012 processed_transcript Homo_sapiens 0 503
ENST00000590540 PIN1-009 processed_transcript Homo_sapiens 0 503
ENST00000591777 PIN1-013 nonsense_mediated_decay Homo_sapiens 0 344

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