C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Obg-like ATPase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100015 Ola1-002 ENSMUSG00000027108 10090 - 2:73137527-73214333 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLiverOvaryPlacentaTestisENSMUST00000100015
Transcript ID Adipose Brain Colon Heart Liver Ovary Placenta Testis
ENSMUST00000100015 4.278±0.00 49.742±0.00 1.119±0.00 2.881±0.00 10.732±1.13 16.564±21.28 38.578±34.25 16.218±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OE CIL_0007OE_0002 UCNEbase 2:72378722-73287933
CIL_0008JW CIL_0008JW_0002 VISTA 2:72839371-73441413
CIL_0008K1 CIL_0008K1_0002 VISTA 2:72842671-73444272
CIL_0008S8 CIL_0008S8_0002 VISTA 2:72879758-73480791
CIL_00096H CIL_00096H_0002 VISTA 2:72968418-73569496
CIL_0008GI CIL_0008GI_0002 VISTA 2:72975594-73577184
CIL_0008K2 CIL_0008K2_0002 VISTA 2:72979567-73580473
CIL_0004JE CIL_0004JE_0002 CGP 2:73092801-73284706

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005525 IEA GTP binding
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0016887 IEA ATPase activity
GO:0043022 IEA ribosome binding
GO:0043023 IEA ribosomal large subunit binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000284719 OLA1-001 protein_coding Homo_sapiens 0 1033
ENST00000344357 OLA1-002 protein_coding Homo_sapiens 0 867
ENST00000392560 OLA1-008 processed_transcript Homo_sapiens 0 289
ENST00000396387 OLA1P1-001 processed_pseudogene Homo_sapiens 0 1000
ENST00000409546 OLA1-003 protein_coding Homo_sapiens 0 1020
ENST00000427472 OLA1-004 protein_coding Homo_sapiens 0 518
ENST00000428402 OLA1-009 protein_coding Homo_sapiens 0 1027
ENST00000429575 OLA1-005 protein_coding Homo_sapiens 0 470
ENST00000462000 OLA1-006 retained_intron Homo_sapiens 0 283
ENST00000606598 OLA1P1-001 processed_pseudogene Homo_sapiens 0 1000
ENST00000606805 AL021878.1-201 pseudogene Homo_sapiens 0 979
ENST00000612983 AL021878.2-201 pseudogene Homo_sapiens 0 979

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