C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: asparagine-linked glycosylation 10B (alpha-1,2-glucosyltransferase)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100309 Alg10b-201 ENSMUSG00000075470 10090 + 15:90224311-90230554 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000100309
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000100309 4.354±0.93 17.140±2.78 2.319±0.00 7.185±1.86 6.998±0.60 2.814±1.52 5.976±3.00 7.850±0.79 6.442±2.74 16.004±4.86 1.535±0.64 1.558±0.76

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006HN CIL_0006HN_0002 CGP 15:89782393-90230554
CIL_00017A CIL_00017A_0002 CGP 15:90224311-90679432

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0007605 IMP sensory perception of sound
GO:0008152 IEA metabolic process
GO:0015459 IEA potassium channel regulator activity
GO:0016021 IEA integral component of membrane
GO:0016758 IEA transferase activity, transferring hexosyl groups
GO:0060117 IMP auditory receptor cell development

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000266483 ALG10-001 protein_coding Homo_sapiens 0 1314
ENST00000308742 ALG10B-001 protein_coding Homo_sapiens 0 1297
ENST00000541875 ALG10-002 nonsense_mediated_decay Homo_sapiens 0 1173
ENST00000548240 ALG10B-004 nonsense_mediated_decay Homo_sapiens 0 1157

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