C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: schlafen 10, pseudogene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000100716 Slfn10-ps-002 ENSMUSG00000072621 10090 - 11:83028130-83040042 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000100716
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000100716 0.151±0.03 0.158±0.01 0.061±0.00 0.011±0.00 0.443±0.07 0.037±0.02 0.047±0.02 0.027±0.01 0.067±0.01 0.017±0.01 0.183±0.08 0.121±0.04 0.009±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003RF CIL_0003RF_0003 CGP 11:83002158-83070678

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000285013 SLFN13-002 protein_coding Homo_sapiens 0 1014
ENST00000308377 SLFN11-002 protein_coding Homo_sapiens 0 909
ENST00000394566 SLFN11-001 protein_coding Homo_sapiens 0 909
ENST00000526861 SLFN13-004 protein_coding Homo_sapiens 0 1014
ENST00000530782 SLFN13-001 nonsense_mediated_decay Homo_sapiens 0 806
ENST00000532210 SLFN13-007 protein_coding Homo_sapiens 0 209
ENST00000532774 SLFN13-010 retained_intron Homo_sapiens 0 381
ENST00000533791 SLFN13-005 protein_coding Homo_sapiens 0 1014
ENST00000534689 SLFN13-003 protein_coding Homo_sapiens 0 806
ENST00000542635 SLFN13-201 protein_coding Homo_sapiens 0 1014
ENST00000586099 SLFN11-013 retained_intron Homo_sapiens 0.00000000003 73

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