C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin K
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101055 Ccnk-201 ENSMUSG00000021258 10090 + 12:108179738-108203359 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101055 1.664±0.44 1.002±0.50 5.386±0.00 7.502±4.19 1.202±0.46 1.977±0.88 2.281±0.94 1.832±0.58 3.312±2.34 1.973±0.60 27.705±2.11 1.101±0.49 4.427±1.07 60.546±4.64

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CK CIL_0009CK_0002 VISTA 12:107949271-108552884
CIL_0003HD CIL_0003HD_0002 CGP 12:108106431-108203359
CIL_0003HE CIL_0003HE_0002 CGP 12:108179738-108275417

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000079 IEA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0001701 IMP in utero embryonic development
GO:0002944 IEA cyclin K-CDK12 complex
GO:0002945 IEA cyclin K-CDK13 complex
GO:0004693 ISO cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IEA protein binding
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006468 IEA protein phosphorylation
GO:0006974 IEA cellular response to DNA damage stimulus
GO:0008353 ISO RNA polymerase II carboxy-terminal domain kinase activity
GO:0019901 IEA protein kinase binding
GO:0071157 ISO negative regulation of cell cycle arrest

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000380243 CCDC85C-001 protein_coding Homo_sapiens 0 749
ENST00000389879 CCNK-001 protein_coding Homo_sapiens 0 2246
ENST00000553636 CCNK-007 retained_intron Homo_sapiens 0 313
ENST00000553865 CCNK-005 retained_intron Homo_sapiens 0 863
ENST00000555049 CCNK-003 protein_coding Homo_sapiens 0 1506
ENST00000555842 CCNK-008 protein_coding Homo_sapiens 0 481
ENST00000556641 CCNK-009 retained_intron Homo_sapiens 0 734
ENST00000557165 CCNK-004 processed_transcript Homo_sapiens 0 745
ENST00000557441 CCNK-006 protein_coding Homo_sapiens 0 989

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