C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: MAM domain containing glycosylphosphatidylinositol anchor 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101379 Mdga2-007 ENSMUSG00000034912 10090 - 12:66471469-67221202 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainHeartKidneyMuscleOvaryPlacentaENSMUST00000101379
Transcript ID Bladder Brain Heart Kidney Muscle Ovary Placenta
ENSMUST00000101379 0.013±0.00 2.263±0.00 0.098±0.01 0.025±0.00 0.013±0.00 0.086±0.04 0.007±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046T CIL_00046T_0002 CGP 12:66283379-67222549
CIL_0005Q4 CIL_0005Q4_0002 CGP 12:66469568-69159186

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0007389 IMP pattern specification process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000357362 MDGA2-002 protein_coding Homo_sapiens 0 3858
ENST00000399232 MDGA2-001 protein_coding Homo_sapiens 0 4165
ENST00000426342 MDGA2-201 protein_coding Homo_sapiens 0 3858
ENST00000482848 MDGA2-006 nonsense_mediated_decay Homo_sapiens 0 1744
ENST00000486952 MDGA2-005 protein_coding Homo_sapiens 0 364
ENST00000554762 MDGA2-007 protein_coding Homo_sapiens 0 961
ENST00000555521 MDGA2-010 retained_intron Homo_sapiens 0 623
ENST00000557238 MDGA2-008 nonsense_mediated_decay Homo_sapiens 0 3075
ENST00000557516 MDGA2-009 retained_intron Homo_sapiens 0 545

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