C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class VI, type 11C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101527 Atp11c-202 ENSMUSG00000062949 10090 - X:60223293-60403981 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101527
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101527 1.757±0.83 1.657±0.17 1.800±0.01 3.339±1.93 1.999±1.03 1.351±0.00 0.766±0.23 1.160±0.50 8.413±7.82 2.433±1.53 0.296±0.08 1.889±1.23 0.694±0.25 0.600±0.46

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000PN CIL_0000PN_0003 CGP X:60055956-60592698
CIL_0001AP CIL_0001AP_0002 CGP X:60223290-60592698

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0002329 IMP pre-B cell differentiation
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005765 IEA lysosomal membrane
GO:0005783 IEA endoplasmic reticulum
GO:0005886 IEA plasma membrane
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IMP phospholipid translocation
GO:0045579 IMP positive regulation of B cell differentiation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000327569 ATP11C-008 protein_coding Homo_sapiens 0 5334
ENST00000361648 ATP11C-009 protein_coding Homo_sapiens 0 4397
ENST00000370557 ATP11C-001 protein_coding Homo_sapiens 0 4490
ENST00000422228 ATP11C-003 protein_coding Homo_sapiens 0 405
ENST00000433868 ATP11C-004 protein_coding Homo_sapiens 0 1472
ENST00000450801 ATP11C-002 protein_coding Homo_sapiens 0 752
ENST00000460773 ATP11C-007 processed_transcript Homo_sapiens 0 3046
ENST00000471746 ATP11C-006 processed_transcript Homo_sapiens 0 1264
ENST00000485626 ATP11C-005 processed_transcript Homo_sapiens 0 841

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