C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: LIM motif-containing protein kinase 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000101638 Limk2-001 ENSMUSG00000020451 10090 - 11:3344256-3409174 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000101638
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000101638 3.740±1.72 5.309±1.10 21.699±9.22 9.810±3.96 5.896±3.04 32.547±3.43 1.654±0.28 4.310±1.31 2.066±1.40 11.098±3.07 1.499±0.50 8.675±2.50 16.368±6.63 2.669±0.30

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004672 IMP protein kinase activity
GO:0004674 IEA protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0005801 IDA cis-Golgi network
GO:0006468 IMP protein phosphorylation
GO:0007283 IMP spermatogenesis
GO:0008270 IEA zinc ion binding
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000093188 limk1a-001 protein_coding Danio_rerio 3e-28 132
ENST00000331728 LIMK2-001 protein_coding Homo_sapiens 0 2538
ENST00000333611 LIMK2-004 protein_coding Homo_sapiens 0 2468
ENST00000340552 LIMK2-003 protein_coding Homo_sapiens 0 2102
ENST00000406516 LIMK2-002 protein_coding Homo_sapiens 0 2098
ENST00000422830 GS1-590J6.2-001 processed_pseudogene Homo_sapiens 0 924
ENST00000425203 LIMK2-005 protein_coding Homo_sapiens 0 189
ENST00000462625 LIMK2-006 retained_intron Homo_sapiens 0 261
ENST00000465937 LIMK2-007 retained_intron Homo_sapiens 0 977
ENST00000467301 LIMK2-008 processed_transcript Homo_sapiens 0 545
ENST00000482270 LIMK2-009 retained_intron Homo_sapiens 0 510

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