C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Rho GTPase activating protein 11A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102545 Arhgap11a-001 ENSMUSG00000041219 10090 - 2:113831546-113848656 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverLungMuscleOvaryPlacentaTestisENSMUST00000102545
Transcript ID Adipose Bladder Brain Breast Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102545 0.705±0.23 0.480±0.02 2.830±1.95 0.307±0.00 9.056±3.32 0.433±0.05 0.141±0.04 1.984±0.39 0.325±0.00 0.622±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097N CIL_00097N_0002 VISTA 2:113391542-113992644
CIL_0008VH CIL_0008VH_0002 VISTA 2:113823388-114423882

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005096 IEA GTPase activator activity
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0043547 IEA positive regulation of GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000361627 ARHGAP11A-001 protein_coding Homo_sapiens 0 1648
ENST00000428041 ARHGAP11B-001 protein_coding Homo_sapiens 0 725
ENST00000543522 ARHGAP11A-005 protein_coding Homo_sapiens 0 1465
ENST00000563110 ARHGAP11B-003 nonsense_mediated_decay Homo_sapiens 0 725
ENST00000563864 ARHGAP11A-004 protein_coding Homo_sapiens 0 1214
ENST00000564902 ARHGAP11B-004 processed_transcript Homo_sapiens 0 556
ENST00000565905 ARHGAP11A-002 protein_coding Homo_sapiens 0 1469
ENST00000566362 ARHGAP11B-009 processed_transcript Homo_sapiens 0 532
ENST00000567348 ARHGAP11A-003 protein_coding Homo_sapiens 0 1471
ENST00000568574 ARHGAP11B-002 retained_intron Homo_sapiens 0 283
ENST00000611363 ARHGAP11A-201 protein_coding Homo_sapiens 0 1465
ENST00000619401 ARHGAP11A-202 protein_coding Homo_sapiens 0 1648
ENST00000621228 ARHGAP11B-202 protein_coding Homo_sapiens 0 725
ENST00000622253 ARHGAP11A-203 protein_coding Homo_sapiens 0 1469
ENST00000622744 ARHGAP11B-201 protein_coding Homo_sapiens 0 725

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