C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ankyrin repeat domain 13a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102578 Ankrd13a-001 ENSMUSG00000041870 10090 + 5:114774677-114805822 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102578
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102578 26.569±0.95 6.022±1.05 23.712±0.17 15.181±7.25 19.903±4.00 33.861±4.67 8.977±0.43 16.732±3.46 15.615±11.75 37.481±3.38 5.519±0.51 22.534±8.17 58.257±21.20 65.777±21.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GG CIL_0001GG_0003 CGP 5:114707760-114775517
CIL_0001GH CIL_0001GH_0003 CGP 5:114727407-114806200

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005768 IEA endosome
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000261739 ANKRD13A-001 protein_coding Homo_sapiens 0 1881
ENST00000308440 ANKRD13D-002 protein_coding Homo_sapiens 5e-29 134
ENST00000447274 ANKRD13D-001 protein_coding Homo_sapiens 7e-29 134
ENST00000506531 ANKRD13D-012 retained_intron Homo_sapiens 2e-20 104
ENST00000511455 ANKRD13D-201 protein_coding Homo_sapiens 5e-29 134
ENST00000512101 ANKRD13D-009 retained_intron Homo_sapiens 2e-16 92
ENST00000514166 ANKRD13D-003 protein_coding Homo_sapiens 4e-20 104
ENST00000514779 ANKRD13D-011 protein_coding Homo_sapiens 1e-29 134
ENST00000546476 ANKRD13A-011 retained_intron Homo_sapiens 0 483
ENST00000547639 ANKRD13A-006 protein_coding Homo_sapiens 0 935
ENST00000551491 ANKRD13A-010 protein_coding Homo_sapiens 0 287
ENST00000553246 ANKRD13A-005 retained_intron Homo_sapiens 0 291
ENST00000553251 ANKRD13A-007 retained_intron Homo_sapiens 0 826

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