C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: karyopherin (importin) alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102590 Kpna6-001 ENSMUSG00000003731 10090 - 4:129643980-129672767 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102590
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102590 5.626±1.10 15.221±6.13 15.611±0.65 12.168±1.08 9.442±9.04 6.806±3.07 6.483±0.89 8.147±3.63 9.294±2.17 3.908±0.63 19.432±0.50 9.171±4.18 15.258±4.27 11.839±6.71

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008AA CIL_0008AA_0002 VISTA 4:129413466-130014337

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006606 IDA protein import into nucleus
GO:0008565 IDA protein transporter activity
GO:0016020 IEA membrane
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0060135 IMP maternal process involved in female pregnancy

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000373625 KPNA6-001 protein_coding Homo_sapiens 0 3579
ENST00000446515 KPNA6-004 protein_coding Homo_sapiens 0 948
ENST00000469790 KPNA6-003 processed_transcript Homo_sapiens 0 1040
ENST00000471599 KPNA6-002 nonsense_mediated_decay Homo_sapiens 0 3437

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