C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 10, non-muscle
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102611 Myh10-001 ENSMUSG00000020900 10090 + 11:68691915-68816632 protein_coding

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102611
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102611 6.345±4.85 0.705±0.22 9.802±0.45 21.474±5.47 1.212±0.38 0.951±0.36 2.662±0.41 3.734±0.95 5.091±4.98 17.655±2.42 2.889±1.07 12.275±15.24 9.191±5.86 8.525±4.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00088C CIL_00088C_0002 VISTA 11:68323475-68924174
CIL_0009AZ CIL_0009AZ_0002 VISTA 11:68337699-68940744

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000146 IEA microfilament motor activity
GO:0000281 IMP mitotic cytokinesis
GO:0001701 IMP in utero embryonic development
GO:0001725 IDA stress fiber
GO:0001764 IMP neuron migration
GO:0001778 IMP plasma membrane repair
GO:0005515 IPI protein binding
GO:0005516 IEA calmodulin binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IDA cytoplasm
GO:0005819 IDA spindle
GO:0005829 TAS cytosol
GO:0005886 IDA plasma membrane
GO:0005938 IDA cell cortex
GO:0006200 IEA ATP catabolic process
GO:0006887 IMP exocytosis
GO:0006930 IMP substrate-dependent cell migration, cell extension
GO:0007097 IMP nuclear migration
GO:0007155 IEA cell adhesion
GO:0007409 IMP axonogenesis
GO:0007411 IMP axon guidance
GO:0007420 IMP brain development
GO:0007512 IMP adult heart development
GO:0008283 IMP cell proliferation
GO:0008360 IMP regulation of cell shape
GO:0016459 IDA myosin complex
GO:0016460 IDA myosin II complex
GO:0021592 IMP fourth ventricle development
GO:0021670 IMP lateral ventricle development
GO:0021678 IMP third ventricle development
GO:0021680 IMP cerebellar Purkinje cell layer development
GO:0030036 IGI actin cytoskeleton organization
GO:0030048 IEA actin filament-based movement
GO:0030239 IMP myofibril assembly
GO:0030424 IDA axon
GO:0030426 IDA growth cone
GO:0030496 IEA midbody
GO:0030898 IEA actin-dependent ATPase activity
GO:0031032 IEA actomyosin structure organization
GO:0031175 IMP neuron projection development
GO:0031594 IDA neuromuscular junction
GO:0032154 IEA cleavage furrow
GO:0042641 IEA actomyosin
GO:0043005 IDA neuron projection
GO:0043025 IDA neuronal cell body
GO:0043197 IDA dendritic spine
GO:0043531 IEA ADP binding
GO:0050885 IMP neuromuscular process controlling balance
GO:0051015 IEA actin filament binding
GO:0055003 IMP cardiac myofibril assembly
GO:0055015 IMP ventricular cardiac muscle cell development
GO:0060041 IMP retina development in camera-type eye
GO:0070062 IEA extracellular vesicular exosome
GO:0097513 IEA myosin II filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000046359 myh10-201 protein_coding Danio_rerio 0 3814
ENSDART00000151114 myh10-001 protein_coding Danio_rerio 0 3814
ENSDART00000150939 myh10-002 protein_coding Danio_rerio 0 3814
ENSDART00000137105 myh9b-001 protein_coding Danio_rerio 0 2124
ENSDART00000092373 myh9b-201 protein_coding Danio_rerio 0 1664
ENSDART00000149823 myh9a-001 protein_coding Danio_rerio 0 1157
ENSDART00000105232 myh9a-202 protein_coding Danio_rerio 0 1138
ENSDART00000011353 myh9a-201 protein_coding Danio_rerio 0 1077
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 0 344
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 0 344
ENST00000216181 MYH9-001 protein_coding Homo_sapiens 0 2881
ENST00000269243 MYH10-001 protein_coding Homo_sapiens 0 8833
ENST00000300036 MYH11-001 protein_coding Homo_sapiens 0 2569
ENST00000360416 MYH10-002 protein_coding Homo_sapiens 0 6141
ENST00000376970 MYH14-202 protein_coding Homo_sapiens 0 1109
ENST00000379980 MYH10-201 protein_coding Homo_sapiens 0 7723
ENST00000396324 MYH11-006 protein_coding Homo_sapiens 0 2499
ENST00000411957 MYH10-003 protein_coding Homo_sapiens 0 845
ENST00000425460 MYH14-203 protein_coding Homo_sapiens 0 933
ENST00000440075 MYH14-204 protein_coding Homo_sapiens 0 536
ENST00000452625 MYH11-013 protein_coding Homo_sapiens 0 2494
ENST00000459986 MYH10-004 retained_intron Homo_sapiens 0 558
ENST00000465458 MYH10-007 retained_intron Homo_sapiens 0 536
ENST00000469865 MYH10-006 retained_intron Homo_sapiens 0 335
ENST00000472728 MYH10-005 retained_intron Homo_sapiens 0 536
ENST00000476737 MYH10-009 retained_intron Homo_sapiens 0 725
ENST00000488329 MYH10-008 retained_intron Homo_sapiens 0 532
ENST00000570785 MYH11-011 retained_intron Homo_sapiens 0 857
ENST00000576790 MYH11-003 protein_coding Homo_sapiens 0 2564
ENST00000584124 MYH10-010 retained_intron Homo_sapiens 0 350
ENST00000596571 MYH14-008 protein_coding Homo_sapiens 0 1109
ENST00000598205 MYH14-006 protein_coding Homo_sapiens 0 933
ENST00000599920 MYH14-007 protein_coding Homo_sapiens 0 861
ENST00000601313 MYH14-001 protein_coding Homo_sapiens 0 564
ENST00000611087 MYH11-201 protein_coding Homo_sapiens 0 2495
ENST00000612165 MYH11-203 protein_coding Homo_sapiens 0 2494
ENST00000614597 MYH11-204 protein_coding Homo_sapiens 0 2495
ENST00000616422 MYH11-205 protein_coding Homo_sapiens 0 2564
ENST00000616439 MYH11-202 protein_coding Homo_sapiens 0 2494
ENST00000618564 MYH11-206 protein_coding Homo_sapiens 0 2494
ENST00000621545 MYH11-207 protein_coding Homo_sapiens 0 2499

Loading