C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: akirin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102636 Akirin1-001 ENSMUSG00000023075 10090 - 4:123734559-123750345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102636
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102636 11.996±6.40 12.706±2.54 11.015±1.85 10.872±3.16 13.564±0.81 15.332±1.66 6.281±1.75 8.532±2.41 8.622±2.92 13.401±1.61 8.910±2.26 14.422±4.22 13.523±5.05 15.532±5.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0001ZS CIL_0001ZS_0002 CGP 4:123734559-123829904

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 ISS nucleus
GO:0008150 ND biological_process
GO:0031965 IEA nuclear membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000372984 AKIRIN1-005 protein_coding Homo_sapiens 0 1208
ENST00000432648 AKIRIN1-001 protein_coding Homo_sapiens 0 1827
ENST00000440655 AKIRIN1P2-001 processed_pseudogene Homo_sapiens 0 501
ENST00000446189 AKIRIN1-004 protein_coding Homo_sapiens 0 992
ENST00000531822 AKIRIN1-007 protein_coding Homo_sapiens 0 477

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