C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: mediator complex subunit 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102645 Med19-001 ENSMUSG00000027080 10090 + 2:84678402-84688215 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverTestisENSMUST00000102645
Transcript ID Liver Testis
ENSMUST00000102645 14.489±0.08 7.181±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00017X CIL_00017X_0002 CGP 2:84671316-84688215

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001104 IEA RNA polymerase II transcription cofactor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006357 IEA regulation of transcription from RNA polymerase II promoter
GO:0006366 IEA transcription from RNA polymerase II promoter
GO:0008150 ND biological_process
GO:0016592 IDA mediator complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287169 ZDHHC5-001 protein_coding Homo_sapiens 6e-21 108
ENST00000337672 MED19-001 protein_coding Homo_sapiens 0 628
ENST00000431606 MED19-002 protein_coding Homo_sapiens 0 983
ENST00000528205 MED19-004 retained_intron Homo_sapiens 0 628
ENST00000529480 ZDHHC5-003 retained_intron Homo_sapiens 8e-19 100
ENST00000534677 MED19-003 retained_intron Homo_sapiens 0 477

Loading