C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5',3'-nucleotidase, mitochondrial
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102695 Nt5m-001 ENSMUSG00000032615 10090 + 11:59848073-59876533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENSMUST00000102695
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENSMUST00000102695 8.991±0.65 21.502±5.35 7.895±0.00 20.718±6.77 9.002±3.94 5.551±2.29 10.965±1.07 9.794±1.03 5.307±1.79 3.148±0.00 13.404±0.30 13.447±5.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009A0 CIL_0009A0_0002 VISTA 11:59693037-60296757
CIL_00040N CIL_00040N_0002 CGP 11:59791408-59839838
CIL_0000NX CIL_0000NX_0002 CGP 11:59817795-59880968
CIL_0000NW CIL_0000NW_0002 CGP 11:59839447-59962205

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0005739 ISO mitochondrion
GO:0008253 IDA 5'-nucleotidase activity
GO:0016311 IEA dephosphorylation
GO:0046079 IDA dUMP catabolic process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000389022 NT5M-007 protein_coding Homo_sapiens 0 787
ENST00000470418 NT5M-004 nonsense_mediated_decay Homo_sapiens 0 392
ENST00000478373 NT5M-002 nonsense_mediated_decay Homo_sapiens 0 339
ENST00000483704 NT5M-003 nonsense_mediated_decay Homo_sapiens 0 496
ENST00000582909 NT5M-006 processed_transcript Homo_sapiens 0 278
ENST00000616989 NT5M-201 protein_coding Homo_sapiens 0 721

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