C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tudor domain containing 7
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000102929 Tdrd7-002 ENSMUSG00000035517 10090 + 4:45972233-46034761 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000102929
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000102929 9.469±0.88 1.535±0.60 8.153±1.42 4.515±1.37 4.667±1.86 5.366±2.87 2.516±0.37 6.741±1.14 4.474±1.52 8.950±1.60 2.479±0.62 5.188±2.35 6.793±2.98 34.573±9.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086Q CIL_00086Q_0002 VISTA 4:45528456-46131469
CIL_0002JB CIL_0002JB_0002 CGP 4:45890303-46034761
CIL_0007HJ CIL_0007HJ_0003 CGP 4:45965334-46116032

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002089 IMP lens morphogenesis in camera-type eye
GO:0003729 ISS mRNA binding
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0007281 IDA germ cell development
GO:0007283 IMP spermatogenesis
GO:0010608 ISS posttranscriptional regulation of gene expression
GO:0030529 IDA ribonucleoprotein complex
GO:0033391 IDA chromatoid body
GO:0035770 ISS ribonucleoprotein granule
GO:0043186 IDA P granule
GO:0070306 IMP lens fiber cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000355295 TDRD7-001 protein_coding Homo_sapiens 0 2809
ENST00000492428 TDRD7-002 processed_transcript Homo_sapiens 0 228

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