C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: transcription elongation factor A (SII), 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103042 Tcea2-001 ENSMUSG00000059540 10090 + 2:181680310-181688071 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103042
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103042 2.959±1.18 1.378±0.25 7.151±1.22 13.471±0.53 1.261±0.15 0.856±0.26 1.975±0.29 1.990±0.36 0.901±0.47 1.810±0.19 1.881±0.65 3.650±0.89 0.812±0.44 247.280±52.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003V3 CIL_0003V3_0002 CGP 2:181669836-181688071
CIL_0007I6 CIL_0007I6_0002 CGP 2:181680310-181693977

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0005813 IEA centrosome
GO:0006351 IEA transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0032784 IEA regulation of DNA-templated transcription, elongation
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000450454 TCEA3-001 protein_coding Homo_sapiens 0 228
ENST00000476978 TCEA3-002 protein_coding Homo_sapiens 4.00001e-41 172

Loading