| Transcript ID | Colon | Muscle | Ovary | Testis |
|---|---|---|---|---|
| ENSMUST00000104893 | 2.093±0.00 | 4.262±0.59 | 3.711±0.96 | 3.397±0.96 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | phosphate cytidylyltransferase 1, choline, alpha isoform | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000104893  |
Pcyt1a-201 |
ENSMUSG00000005615 |
10090 | + |
16:32431020-32475065  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008QR | CIL_0008QR_0002 | VISTA | 16:32268412-32870796 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0004105 | ISS | choline-phosphate cytidylyltransferase activity |
| GO:0005515 | IPI | protein binding |
| GO:0005789 | IDA | endoplasmic reticulum membrane |
| GO:0006656 | IDA | phosphatidylcholine biosynthetic process |
| GO:0006657 | ISS | CDP-choline pathway |
| GO:0008289 | IEA | lipid binding |
| GO:0042587 | IDA | glycogen granule |
| GO:0042803 | IEA | protein homodimerization activity |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSDART00000125106
|
pcyt1aa-201 | protein_coding | Danio_rerio | 0 | 604 |
|
ENSDART00000018524
|
pcyt1aa-001 | protein_coding | Danio_rerio | 0 | 604 |
|
ENST00000292823
|
PCYT1A-001 | protein_coding | Homo_sapiens | 0 | 2026 |
|
ENST00000411591
|
PCYT1A-009 | protein_coding | Homo_sapiens | 0 | 1182 |
|
ENST00000412869
|
PCYT1A-014 | protein_coding | Homo_sapiens | 0 | 555 |
|
ENST00000419333
|
PCYT1A-006 | protein_coding | Homo_sapiens | 0 | 1408 |
|
ENST00000430755
|
PCYT1A-018 | protein_coding | Homo_sapiens | 0 | 678 |
|
ENST00000431016
|
PCYT1A-005 | protein_coding | Homo_sapiens | 0 | 1550 |
|
ENST00000431391
|
RP11-447L10.1-001 | nonsense_mediated_decay | Homo_sapiens | 0 | 427 |
|
ENST00000433733
|
PCYT1A-016 | protein_coding | Homo_sapiens | 0 | 429 |
|
ENST00000438634
|
PCYT1A-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 411 |
|
ENST00000441879
|
PCYT1A-011 | protein_coding | Homo_sapiens | 0 | 651 |
|
ENST00000443555
|
PCYT1A-007 | protein_coding | Homo_sapiens | 0 | 475 |
|
ENST00000444822
|
PCYT1A-010 | nonsense_mediated_decay | Homo_sapiens | 0 | 459 |
|
ENST00000460677
|
PCYT1A-002 | retained_intron | Homo_sapiens | 0 | 459 |
|
ENST00000460827
|
PCYT1A-017 | retained_intron | Homo_sapiens | 0 | 405 |
|
ENST00000473978
|
PCYT1A-004 | retained_intron | Homo_sapiens | 0 | 459 |
|
ENST00000488235
|
PCYT1A-015 | retained_intron | Homo_sapiens | 0 | 375 |
|
ENST00000491544
|
PCYT1A-013 | processed_transcript | Homo_sapiens | 0 | 459 |
