C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: IKAROS family zinc finger 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105233 Ikzf4-003 ENSMUSG00000002578 10090 - 10:128632469-128645844 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105233
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105233 0.332±0.15 0.295±0.00 2.424±1.13 0.714±0.12 0.227±0.09 0.129±0.08 0.384±0.14 0.074±0.05 0.316±0.03 0.102±0.05 0.393±0.12 0.264±0.16 0.482±0.12

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00079K CIL_00079K_0002 CGP 10:128624530-128645991

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0042803 IPI protein homodimerization activity
GO:0043425 IPI bHLH transcription factor binding
GO:0043565 IDA sequence-specific DNA binding
GO:0045892 IPI negative regulation of transcription, DNA-templated
GO:0045944 IMP positive regulation of transcription from RNA polymerase II promoter
GO:0046982 IPI protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000053878 IKZF4-201 protein_coding Danio_rerio 1e-32 147
ENSDART00000145028 IKZF4-001 protein_coding Danio_rerio 1e-32 147
ENST00000262032 IKZF4-001 protein_coding Homo_sapiens 0 2215
ENST00000331340 IKZF1-001 protein_coding Homo_sapiens 1e-34 154
ENST00000343574 IKZF1-201 protein_coding Homo_sapiens 1e-34 154
ENST00000346667 IKZF1-202 protein_coding Homo_sapiens 9e-35 154
ENST00000349824 IKZF1-203 protein_coding Homo_sapiens 1e-34 154
ENST00000357364 IKZF1-204 protein_coding Homo_sapiens 1e-34 154
ENST00000359197 IKZF1-002 protein_coding Homo_sapiens 6e-35 154
ENST00000431367 IKZF4-201 protein_coding Homo_sapiens 0 2215
ENST00000438033 IKZF1-003 protein_coding Homo_sapiens 3e-35 154
ENST00000439701 IKZF1-004 protein_coding Homo_sapiens 6e-35 154
ENST00000440768 IKZF1-205 protein_coding Homo_sapiens 1e-34 154
ENST00000471793 IKZF1-005 retained_intron Homo_sapiens 3e-35 154
ENST00000547167 IKZF4-003 protein_coding Homo_sapiens 0 2215
ENST00000547556 IKZF4-012 retained_intron Homo_sapiens 0 444
ENST00000547668 IKZF4-009 processed_transcript Homo_sapiens 0 370
ENST00000547791 IKZF4-005 protein_coding Homo_sapiens 0 2204
ENST00000548601 IKZF4-007 processed_transcript Homo_sapiens 0 815
ENST00000549519 IKZF4-008 processed_transcript Homo_sapiens 0 246
ENST00000550860 IKZF4-006 processed_transcript Homo_sapiens 0 207
ENST00000551103 IKZF4-002 nonsense_mediated_decay Homo_sapiens 0 2215
ENST00000551124 IKZF4-004 retained_intron Homo_sapiens 0 2218
ENST00000551701 IKZF4-013 processed_transcript Homo_sapiens 0 678
ENST00000612658 IKZF1-206 protein_coding Homo_sapiens 2e-35 154
ENST00000615491 IKZF1-207 protein_coding Homo_sapiens 1e-34 154

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