C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: reticulon 4 interacting protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105492 Rtn4ip1-002 ENSMUSG00000019864 10090 + 10:43921035-43947862 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryENSMUST00000105492
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary
ENSMUST00000105492 2.259±0.67 3.137±0.51 1.342±0.00 3.329±1.66 2.628±0.69 6.074±1.44 4.643±0.81 2.749±1.64 1.430±0.00 2.007±0.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085F CIL_00085F_0002 VISTA 10:43422435-44024831
CIL_0008PN CIL_0008PN_0002 VISTA 10:43446138-44046678

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005739 ISO mitochondrion
GO:0008270 IEA zinc ion binding
GO:0016491 IEA oxidoreductase activity
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369063 RTN4IP1-001 protein_coding Homo_sapiens 0 669

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