C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: apoptosis-inducing, TAF9-like domain 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105695 Apitd1-003 ENSMUSG00000073705 10090 - 4:149131355-149137577 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverLungMuscleOvaryPlacentaTestisENSMUST00000105695
Transcript ID Adipose Adrenal Breast Colon Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105695 0.897±0.00 1.588±0.40 0.560±0.22 0.652±0.11 0.454±0.00 0.240±0.00 0.269±0.00 1.060±0.28 0.396±0.00 2.001±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008S2 CIL_0008S2_0002 VISTA 4:148555953-149160332
CIL_00082Y CIL_00082Y_0002 VISTA 4:148576108-149176659
CIL_00085P CIL_00085P_0002 VISTA 4:148597228-149198219
CIL_0007WE CIL_0007WE_0002 VISTA 4:148621504-149222572
CIL_0008IM CIL_0008IM_0002 VISTA 4:148744049-149345133

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000712 ISS resolution of meiotic recombination intermediates
GO:0000776 IEA kinetochore
GO:0003677 ISS DNA binding
GO:0003682 ISS chromatin binding
GO:0003690 ISS double-stranded DNA binding
GO:0006281 ISS DNA repair
GO:0006974 ISS cellular response to DNA damage stimulus
GO:0007067 IEA mitotic nuclear division
GO:0031297 ISS replication fork processing
GO:0043240 ISS Fanconi anaemia nuclear complex
GO:0046982 IEA protein heterodimerization activity
GO:0071821 ISS FANCM-MHF complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000309048 APITD1-001 protein_coding Homo_sapiens 0 193
ENST00000400900 APITD1-CORT-001 protein_coding Homo_sapiens 0 193
ENST00000470413 APITD1-CORT-002 protein_coding Homo_sapiens 0 193
ENST00000477755 APITD1-002 protein_coding Homo_sapiens 4e-36 156
ENST00000602296 APITD1-CORT-201 protein_coding Homo_sapiens 0.0000001 62
ENST00000602787 APITD1-CORT-202 protein_coding Homo_sapiens 0 193

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