Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	troponin T3, skeletal, fast
ENSMUST00000105949	Tnnt3-009	ENSMUSG00000061723	10090	+	7:142498872-142516004	protein_coding

Expression Patterns

Transcript ID	Adipose	Brain	Breast	Colon	Heart	Liver	Ovary	Placenta
ENSMUST00000105949	1.100±0.00	0.333±0.00	0.155±0.00	0.186±0.00	0.371±0.00	0.090±0.04	0.970±0.26	2.835±1.89

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0008MR	CIL_0008MR_0002	VISTA	7:142247512-142849546
CIL_0007RG	CIL_0007RG_0002	VISTA	7:142251566-142854813
CIL_00097V	CIL_00097V_0002	VISTA	7:142268912-142873912
CIL_0005NK	CIL_0005NK_0003	CGP	7:142460809-142506771
CIL_0003FO	CIL_0003FO_0003	CGP	7:142491074-142516009
CIL_00048I	CIL_00048I_0002	CGP	7:142498836-142540747

Gene Ontology
GO ID	Evidence Type	GO Description
GO:0005861	IEA	troponin complex
GO:0006942	IEA	regulation of striated muscle contraction

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENST00000278317	TNNT3-001	protein_coding	Homo_sapiens	0	841
ENST00000344578	TNNT3-011	protein_coding	Homo_sapiens	0	904
ENST00000381557	TNNT3-006	protein_coding	Homo_sapiens	0	933
ENST00000381558	TNNT3-004	protein_coding	Homo_sapiens	0	880
ENST00000381563	TNNT3-012	protein_coding	Homo_sapiens	0	859
ENST00000381579	TNNT3-003	protein_coding	Homo_sapiens	0	774
ENST00000381589	TNNT3-002	protein_coding	Homo_sapiens	0	837
ENST00000397301	TNNT3-010	protein_coding	Homo_sapiens	0	841
ENST00000397304	TNNT3-014	protein_coding	Homo_sapiens	0	845
ENST00000446240	TNNT3-015	protein_coding	Homo_sapiens	0	739
ENST00000453458	TNNT3-007	protein_coding	Homo_sapiens	0	715
ENST00000492075	TNNT3-009	processed_transcript	Homo_sapiens	0	586
ENST00000493234	TNNT3-008	processed_transcript	Homo_sapiens	0	486

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