C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: troponin I, skeletal, fast 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000105971 Tnni2-001 ENSMUSG00000031097 10090 + 7:142441808-142444410 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000105971
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000105971 11.819±8.32 0.343±0.00 505.276±540.02 0.127±0.02 3.202±1.07 29.595±29.46 1.551±1.81 68.206±66.88 9947.709±302.65 3.992±1.81 2.377±0.29 0.185±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008MR CIL_0008MR_0002 VISTA 7:142247512-142849546
CIL_0007RG CIL_0007RG_0002 VISTA 7:142251566-142854813
CIL_00097V CIL_00097V_0002 VISTA 7:142268912-142873912
CIL_00048J CIL_00048J_0002 CGP 7:142434850-142444410
CIL_0005ML CIL_0005ML_0003 CGP 7:142441808-142494867

Gene Ontology

GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252898 TNNI2-201 protein_coding Homo_sapiens 0 747
ENST00000381905 TNNI2-003 protein_coding Homo_sapiens 0 723
ENST00000381906 TNNI2-001 protein_coding Homo_sapiens 0 758
ENST00000381911 TNNI2-002 protein_coding Homo_sapiens 0 809
ENST00000617947 TNNI2-202 protein_coding Homo_sapiens 0 736

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