| Transcript ID | Colon | Liver |
|---|---|---|
| ENSMUST00000106023 | 19.281±5.45 | 5.645±2.54 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | interferon regulatory factor 7 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000106023  |
Irf7-003 |
ENSMUSG00000025498 |
10090 | - |
7:141262706-141266421  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0006S8 | CIL_0006S8_0003 | CGP | 7:141215860-141262750 |
| CIL_0006RQ | CIL_0006RQ_0003 | CGP | 7:141228784-141266481 |
| CIL_0003OO | CIL_0003OO_0002 | CGP | 7:141262706-141276786 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000975 | IEA | regulatory region DNA binding |
| GO:0000982 | IDA | RNA polymerase II core promoter proximal region sequence-specific DNA binding transcription factor activity |
| GO:0005515 | IPI | protein binding |
| GO:0006357 | IDA | regulation of transcription from RNA polymerase II promoter |
| GO:0006366 | IDA | transcription from RNA polymerase II promoter |
| GO:0016064 | IMP | immunoglobulin mediated immune response |
| GO:0045351 | IMP | type I interferon biosynthetic process |
| GO:0060340 | IMP | positive regulation of type I interferon-mediated signaling pathway |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000330243
|
IRF7-001 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000348655
|
IRF7-005 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000397566
|
IRF7-201 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000397570
|
IRF7-202 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000397574
|
IRF7-002 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000469048
|
IRF7-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 435 |
|
ENST00000525445
|
IRF7-006 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000531912
|
IRF7-013 | retained_intron | Homo_sapiens | 0 | 230 |
|
ENST00000532326
|
IRF7-012 | nonsense_mediated_decay | Homo_sapiens | 0 | 435 |
|
ENST00000533182
|
IRF7-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 435 |
|
ENST00000612534
|
IRF7-203 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000617397
|
IRF7-204 | protein_coding | Homo_sapiens | 0 | 435 |
|
ENST00000621391
|
IRF7-205 | protein_coding | Homo_sapiens | 0 | 435 |
