C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: rhomboid, veinlet-like 2 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106204 Rhbdl2-001 ENSMUSG00000043333 10090 + 4:123809914-123829904 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000106204
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000106204 0.490±0.11 0.287±0.19 0.258±0.00 0.547±0.36 12.023±5.32 0.082±0.05 0.413±0.18 0.018±0.01 0.215±0.01 0.088±0.02 0.596±0.25 0.109±0.00 0.839±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000990 CIL_000990_0002 VISTA 4:123304867-123907516
CIL_0007Q3 CIL_0007Q3_0002 VISTA 4:123648792-124248792
CIL_0008G7 CIL_0008G7_0002 VISTA 4:123690360-124291795
CIL_0001ZS CIL_0001ZS_0002 CGP 4:123734559-123829904
CIL_0008PZ CIL_0008PZ_0002 VISTA 4:123735337-124336861

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004252 IMP serine-type endopeptidase activity
GO:0005886 ISS plasma membrane
GO:0006508 IEA proteolysis
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000289248 RHBDL2-001 protein_coding Homo_sapiens 0 1011
ENST00000372990 RHBDL2-201 protein_coding Homo_sapiens 0 1011
ENST00000540558 RHBDL2-002 protein_coding Homo_sapiens 0 390

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