C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: eukaryotic translation initiation factor 4A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106253 Eif4a3-003 ENSMUSG00000025580 10090 - 11:119292841-119300014 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaTestisENSMUST00000106253
Transcript ID Brain Ovary Placenta Testis
ENSMUST00000106253 16.282±0.00 29.111±0.00 34.724±13.87 11.035±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00005R CIL_00005R_0002 CGP 11:119267887-119300089
CIL_00031S CIL_00031S_0002 CGP 11:119288363-119345375

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0008026 IEA ATP-dependent helicase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000014887 eif4a3-001 protein_coding Danio_rerio 0 595
ENSDART00000156937 eif4a3-004 retained_intron Danio_rerio 0 315
ENSDART00000154277 eif4a3-002 nonsense_mediated_decay Danio_rerio 0 270
ENST00000269349 EIF4A3-001 protein_coding Homo_sapiens 0 660
ENST00000575957 EIF4A3-004 retained_intron Homo_sapiens 0 401
ENST00000575978 EIF4A3-002 retained_intron Homo_sapiens 7.9874e-44 183
ENST00000576547 EIF4A3-005 protein_coding Homo_sapiens 0 464

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