C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110004F10 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106607 1110004F10Rik-002 ENSMUSG00000030663 10090 + 7:116093341-116105207 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBreastHeartKidneyLiverLungOvaryENSMUST00000106607
Transcript ID Adipose Breast Heart Kidney Liver Lung Ovary
ENSMUST00000106607 7.711±1.36 34.565±0.00 4.879±1.51 5.041±0.00 7.014±0.00 9.369±0.39 22.970±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081X CIL_00081X_0002 VISTA 7:115524528-116125832
CIL_0008LR CIL_0008LR_0002 VISTA 7:115564594-116167473
CIL_000836 CIL_000836_0002 VISTA 7:115904293-116509702
CIL_0003ZQ CIL_0003ZQ_0002 CGP 7:116093301-116308376

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228136 C11orf58-001 protein_coding Homo_sapiens 0 676
ENST00000524439 C11orf58-004 protein_coding Homo_sapiens 3.9937e-43 178
ENST00000524461 C11orf58-002 retained_intron Homo_sapiens 0 652
ENST00000525684 C11orf58-006 protein_coding Homo_sapiens 0 254
ENST00000528634 C11orf58-005 protein_coding Homo_sapiens 1e-24 117
ENST00000531658 C11orf58-003 retained_intron Homo_sapiens 0 654
ENST00000555080 RP11-305B6.1-001 processed_pseudogene Homo_sapiens 0 255

Loading