C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1110004F10 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106608 1110004F10Rik-004 ENSMUSG00000030663 10090 + 7:116093336-116104831 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleOvaryPlacentaTestisENSMUST00000106608
Transcript ID Brain Muscle Ovary Placenta Testis
ENSMUST00000106608 40.047±0.00 3.244±0.00 28.476±19.76 45.730±7.15 51.670±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081X CIL_00081X_0002 VISTA 7:115524528-116125832
CIL_0008LR CIL_0008LR_0002 VISTA 7:115564594-116167473
CIL_000836 CIL_000836_0002 VISTA 7:115904293-116509702
CIL_0003ZQ CIL_0003ZQ_0002 CGP 7:116093301-116308376

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000228136 C11orf58-001 protein_coding Homo_sapiens 0 904
ENST00000524439 C11orf58-004 protein_coding Homo_sapiens 0 278
ENST00000524461 C11orf58-002 retained_intron Homo_sapiens 0 756
ENST00000525106 C11orf58-008 retained_intron Homo_sapiens 0 233
ENST00000525256 C11orf58-007 retained_intron Homo_sapiens 0 231
ENST00000525684 C11orf58-006 protein_coding Homo_sapiens 0 255
ENST00000527893 C11orf58-011 processed_transcript Homo_sapiens 0 233
ENST00000528634 C11orf58-005 protein_coding Homo_sapiens 0 344
ENST00000531658 C11orf58-003 retained_intron Homo_sapiens 0 658
ENST00000555080 RP11-305B6.1-001 processed_pseudogene Homo_sapiens 0 455

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