C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: solute carrier family 16 (monocarboxylic acid transporters), member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106723 Slc16a4-003 ENSMUSG00000027896 10090 + 3:107291315-107307717 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000106723
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000106723 0.204±0.00 0.250±0.13 0.227±0.04 0.079±0.02 0.122±0.07 10.442±3.48 0.070±0.00 0.116±0.00 1.008±0.22 3.001±0.00 0.288±0.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00075S CIL_00075S_0002 CGP 3:107278858-107312115
CIL_00075R CIL_00075R_0002 CGP 3:107291230-107333289

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005886 IEA plasma membrane
GO:0015293 IEA symporter activity
GO:0016021 IEA integral component of membrane
GO:0055085 IEA transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000369779 SLC16A4-001 protein_coding Homo_sapiens 0 1290
ENST00000369781 SLC16A4-004 protein_coding Homo_sapiens 0 636
ENST00000437429 SLC16A4-201 protein_coding Homo_sapiens 0 881
ENST00000461647 SLC16A4-003 nonsense_mediated_decay Homo_sapiens 0 340
ENST00000467986 SLC16A4-007 protein_coding Homo_sapiens 0 566
ENST00000472422 SLC16A4-002 protein_coding Homo_sapiens 0 874
ENST00000492412 SLC16A4-008 nonsense_mediated_decay Homo_sapiens 0 1029
ENST00000528649 SLC16A4-006 nonsense_mediated_decay Homo_sapiens 0 881
ENST00000541986 SLC16A4-202 protein_coding Homo_sapiens 0 1029

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