C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: DnaJ (Hsp40) homolog, subfamily C, member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000106929 Dnajc6-201 ENSMUSG00000028528 10090 + 4:101508000-101642798 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000106929
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000106929 0.124±0.01 0.760±0.20 0.373±0.00 9.446±4.53 0.177±0.00 0.337±0.25 4.636±1.38 0.038±0.02 0.497±0.23 0.658±0.36 0.654±0.45

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000266 CIL_000266_0002 CGP 4:101419277-101642799
CIL_000267 CIL_000267_0002 CGP 4:101496648-101659364

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0017124 IEA SH3 domain binding
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0045202 IMP synapse
GO:0072318 IGI clathrin coat disassembly
GO:2000369 IMP regulation of clathrin-mediated endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000263441 DNAJC6-201 protein_coding Homo_sapiens 0 3376
ENST00000371069 DNAJC6-002 protein_coding Homo_sapiens 0 3376
ENST00000395325 DNAJC6-001 protein_coding Homo_sapiens 0 3554
ENST00000463018 DNAJC6-004 processed_transcript Homo_sapiens 0 453
ENST00000472787 DNAJC6-006 processed_transcript Homo_sapiens 0 387
ENST00000483402 DNAJC6-005 processed_transcript Homo_sapiens 3.9937e-43 178
ENST00000494710 DNAJC6-008 protein_coding Homo_sapiens 0 1740
ENST00000498720 DNAJC6-007 processed_transcript Homo_sapiens 0 582

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