C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: SH3-domain GRB2-like 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107184 Sh3gl2-004 ENSMUSG00000028488 10090 + 4:85205535-85377691 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; LiverPlacentaTestisENSMUST00000107184
Transcript ID Liver Placenta Testis
ENSMUST00000107184 0.037±0.00 0.052±0.00 6.284±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008E9 CIL_0008E9_0002 VISTA 4:84686009-85288497
CIL_0007VQ CIL_0007VQ_0002 VISTA 4:84695828-85296432
CIL_00013X CIL_00013X_0002 CGP 4:84884309-85639195
CIL_00013Y CIL_00013Y_0002 CGP 4:85205126-86428385

Gene Ontology

GO IDEvidence TypeGO Description
GO:0002090 IDA regulation of receptor internalization
GO:0005515 IPI protein binding
GO:0005737 IEA cytoplasm
GO:0048488 IGI synaptic vesicle endocytosis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000324537 SH3GL3-001 protein_coding Homo_sapiens 0.000000001 69
ENST00000380607 SH3GL2-001 protein_coding Homo_sapiens 0 599
ENST00000427482 SH3GL3-002 protein_coding Homo_sapiens 3e-20 104
ENST00000492099 SH3GL3-003 retained_intron Homo_sapiens 0.00000000002 75
ENST00000563901 SH3GL3-005 nonsense_mediated_decay Homo_sapiens 0.00000000002 75

Loading