C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: solute carrier organic anion transporter family, member 3a1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107453 Slco3a1-003 ENSMUSG00000025790 10090 - 7:74295371-74554780 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalColonLiverOvaryENSMUST00000107453
Transcript ID Adrenal Colon Liver Ovary
ENSMUST00000107453 3.176±0.36 1.700±0.06 0.266±0.00 7.089±0.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001GT CIL_0001GT_0002 CGP 7:73939119-74554780

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005215 IEA transporter activity
GO:0006810 IEA transport
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000318445 SLCO3A1-001 protein_coding Homo_sapiens 0 2516
ENST00000424469 SLCO3A1-002 protein_coding Homo_sapiens 0 2357
ENST00000553653 SLCO3A1-003 retained_intron Homo_sapiens 0 2571
ENST00000555210 SLCO3A1-013 nonsense_mediated_decay Homo_sapiens 0 536
ENST00000555549 SLCO3A1-005 processed_transcript Homo_sapiens 0 1321
ENST00000555769 SLCO3A1-006 processed_transcript Homo_sapiens 0 2012
ENST00000555892 SLCO3A1-012 nonsense_mediated_decay Homo_sapiens 0 569
ENST00000556649 SLCO3A1-009 processed_transcript Homo_sapiens 0 501

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