C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 652
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000107717 Zfp652-001 ENSMUSG00000075595 10090 + 11:95712673-95772353 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000107717
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000107717 5.444±1.89 6.548±1.13 4.712±1.72 3.895±2.20 3.125±0.75 4.086±0.96 3.589±0.00 2.331±0.63 15.620±0.00 13.706±0.74 5.807±2.37 1.966±0.58 0.640±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004S8 CIL_0004S8_0002 CGP 11:95666957-95835115

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005515 IEA protein binding
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008150 ND biological_process
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000089923 znf652-201 protein_coding Danio_rerio 0 839
ENSDART00000146651 znf652-001 protein_coding Danio_rerio 0 821
ENST00000232974 ZBTB47-002 protein_coding Homo_sapiens 0 684
ENST00000362063 ZNF652-001 protein_coding Homo_sapiens 0 2266
ENST00000430262 ZNF652-002 protein_coding Homo_sapiens 0 2200
ENST00000442420 ZNF652P1-001 processed_pseudogene Homo_sapiens 0 712
ENST00000505904 ZBTB47-003 protein_coding Homo_sapiens 0 684
ENST00000508237 ZNF652-003 nonsense_mediated_decay Homo_sapiens 0 1048
ENST00000513488 ZNF652-004 processed_transcript Homo_sapiens 0 394

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