C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: spermatogenesis associated 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108112 Spata5-001 ENSMUSG00000027722 10090 + 3:37419896-37579096 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainKidneyLiverOvaryPlacentaTestisENSMUST00000108112
Transcript ID Adipose Brain Kidney Liver Ovary Placenta Testis
ENSMUST00000108112 1.934±0.00 1.569±0.14 1.192±0.00 1.483±0.63 1.760±0.16 1.737±0.00 4.357±1.09

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007V2 CIL_0007V2_0002 VISTA 3:37371698-37974083
CIL_0006YK CIL_0006YK_0003 CGP 3:37404910-37579096
CIL_0007AG CIL_0007AG_0002 CGP 3:37419896-37644598

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0005739 IEA mitochondrion
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000274008 SPATA5-001 protein_coding Homo_sapiens 0 2826
ENST00000422835 SPATA5-002 processed_transcript Homo_sapiens 0 2488

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