C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: tetratricopeptide repeat domain 14
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108210 Ttc14-008 ENSMUSG00000027677 10090 + 3:33800251-33809944 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderLiverMuscleOvaryPlacentaENSMUST00000108210
Transcript ID Bladder Liver Muscle Ovary Placenta
ENSMUST00000108210 9.913±0.74 4.991±0.87 1.657±0.34 10.126±0.20 6.739±1.13

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001FH CIL_0001FH_0002 CGP 3:32949408-33814860
CIL_00081N CIL_00081N_0002 VISTA 3:33582396-34183856
CIL_00081O CIL_00081O_0002 VISTA 3:33605209-34206178
CIL_0001FQ CIL_0001FQ_0002 CGP 3:33799955-33844310

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0005515 IPI protein binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000296015 TTC14-001 protein_coding Homo_sapiens 0 1624
ENST00000382584 TTC14-005 protein_coding Homo_sapiens 0 1170
ENST00000412756 TTC14-002 protein_coding Homo_sapiens 0 821
ENST00000420179 RP5-1049N15.2-001 processed_pseudogene Homo_sapiens 0 364
ENST00000462895 TTC14-007 nonsense_mediated_decay Homo_sapiens 0 614
ENST00000465065 TTC14-003 nonsense_mediated_decay Homo_sapiens 0 821
ENST00000465625 TTC14-010 processed_transcript Homo_sapiens 0 693
ENST00000470669 TTC14-004 nonsense_mediated_decay Homo_sapiens 0 782
ENST00000489868 CCDC39-007 protein_coding Homo_sapiens 0 198
ENST00000491380 TTC14-006 protein_coding Homo_sapiens 0 475
ENST00000492617 TTC14-008 protein_coding Homo_sapiens 0 697
ENST00000495660 TTC14-009 protein_coding Homo_sapiens 0 699

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