C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: EF-hand calcium binding domain 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108400 Efcab5-001 ENSMUSG00000050944 10090 - 11:77089915-77188968 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108400
Transcript ID Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108400 0.190±0.00 0.072±0.04 0.228±0.14 0.101±0.02 0.077±0.02 0.059±0.01 0.074±0.02 0.017±0.00 0.095±0.00 0.024±0.00 21.394±3.89

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005509 IEA calcium ion binding
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394835 EFCAB5-003 protein_coding Homo_sapiens 0 1611
ENST00000419434 EFCAB5-002 protein_coding Homo_sapiens 0 1175
ENST00000440741 EFCAB5-001 nonsense_mediated_decay Homo_sapiens 0 320
ENST00000536908 EFCAB5-004 protein_coding Homo_sapiens 0 320
ENST00000588978 EFCAB5-012 protein_coding Homo_sapiens 0 272

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