C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: lethal giant larvae homolog 1 (Drosophila)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108719 Llgl1-002 ENSMUSG00000020536 10090 + 11:60699845-60714186 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000108719
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000108719 16.315±2.29 13.903±3.83 12.636±0.27 29.309±18.60 18.151±0.83 16.759±2.63 7.364±1.11 9.162±2.00 5.418±2.03 18.537±0.79 3.594±0.42 31.371±11.10 8.648±2.07 4.547±0.35

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000E2 CIL_0000E2_0002 CGP 11:60536381-60714186
CIL_0005J2 CIL_0005J2_0002 CGP 11:60699723-60727263

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000137 ISS Golgi cis cisterna
GO:0005097 ISS Rab GTPase activator activity
GO:0005737 IDA cytoplasm
GO:0005856 IDA cytoskeleton
GO:0006887 IEA exocytosis
GO:0006893 ISS Golgi to plasma membrane transport
GO:0007409 ISS axonogenesis
GO:0007420 TAS brain development
GO:0030424 ISS axon
GO:0031901 ISS early endosome membrane
GO:0032588 ISS trans-Golgi network membrane
GO:0032851 ISS positive regulation of Rab GTPase activity
GO:0035090 IMP maintenance of apical/basal cell polarity
GO:0035748 IDA myelin sheath abaxonal region

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000146700 llgl1-003 protein_coding Danio_rerio 0 610
ENSDART00000003511 llgl1-201 protein_coding Danio_rerio 0 595
ENST00000316843 LLGL1-001 protein_coding Homo_sapiens 0 3216
ENST00000327031 FLII-001 protein_coding Homo_sapiens 0.000000003 69
ENST00000479155 LLGL1-002 retained_intron Homo_sapiens 0 959
ENST00000545457 FLII-019 protein_coding Homo_sapiens 0.000002 60
ENST00000577398 FLII-030 protein_coding Homo_sapiens 0.0000000006 69
ENST00000578558 FLII-026 protein_coding Homo_sapiens 0.000000002 69
ENST00000581858 FLII-034 nonsense_mediated_decay Homo_sapiens 0.0000000004 69
ENST00000621229 LLGL1-201 protein_coding Homo_sapiens 0 3101

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