C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cyclin-dependent kinase-like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109079 Cdkl3-202 ENSMUSG00000020389 10090 + 11:52004221-52033802 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverOvaryPlacentaTestisENSMUST00000109079
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000109079 0.792±0.13 0.487±0.00 2.351±0.98 1.215±0.18 0.403±0.23 0.386±0.00 0.328±0.01 0.192±0.13 0.974±0.43 0.262±0.00 37.567±10.79

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IEA protein serine/threonine kinase activity
GO:0004693 IEA cyclin-dependent protein serine/threonine kinase activity
GO:0005524 IEA ATP binding
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0030517 IMP negative regulation of axon extension
GO:0050775 IMP positive regulation of dendrite morphogenesis
GO:0051726 IEA regulation of cell cycle
GO:0097484 IMP dendrite extension

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000265334 CDKL3-001 protein_coding Homo_sapiens 0 1591
ENST00000519312 CDKL3-003 nonsense_mediated_decay Homo_sapiens 0 409
ENST00000520693 CDKL3-007 nonsense_mediated_decay Homo_sapiens 0 289
ENST00000521118 CDKL3-006 protein_coding Homo_sapiens 0 1592
ENST00000521755 CDKL3-010 protein_coding Homo_sapiens 5e-29 132
ENST00000522501 CDKL3-009 processed_transcript Homo_sapiens 0 289
ENST00000523054 CDKL3-002 protein_coding Homo_sapiens 0 1347
ENST00000523832 CDKL3-008 protein_coding Homo_sapiens 0 1232

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