C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: jade family PHD finger 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000109090 Jade2-002 ENSMUSG00000020387 10090 - 11:51813455-51857653 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalLiverOvaryPlacentaENSMUST00000109090
Transcript ID Adrenal Liver Ovary Placenta
ENSMUST00000109090 2.060±0.70 0.383±0.00 1.615±0.00 0.357±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089W CIL_00089W_0002 VISTA 11:51640537-52246109

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0008270 IEA zinc ion binding
GO:0060395 IDA SMAD protein signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282605 JADE2-003 protein_coding Homo_sapiens 0 2119
ENST00000361895 JADE2-001 protein_coding Homo_sapiens 0 2425
ENST00000395003 JADE2-002 protein_coding Homo_sapiens 0 1995
ENST00000402835 JADE2-007 protein_coding Homo_sapiens 0 2093
ENST00000413543 JADE1-001 protein_coding Homo_sapiens 1e-22 113
ENST00000430087 JADE2-006 nonsense_mediated_decay Homo_sapiens 0 804
ENST00000431355 JADE2-008 protein_coding Homo_sapiens 0 985
ENST00000453515 JADE2-009 processed_transcript Homo_sapiens 0 531
ENST00000470876 JADE2-004 retained_intron Homo_sapiens 0 878
ENST00000511647 JADE1-002 protein_coding Homo_sapiens 1e-22 113
ENST00000512386 JADE2-011 protein_coding Homo_sapiens 0 555
ENST00000515554 JADE2-010 processed_transcript Homo_sapiens 0 527
ENST00000612830 JADE2-201 protein_coding Homo_sapiens 0 804

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